Controls Automation Engineer

The Controls/Automation Engineer will play a strategic and high-impact role in advancing The Jackson Laboratory's JMCRS (Jackson Mice & Clinical Research Services) operations and broader institutional initiatives. This position is central to the success of a major automation initiative in collaboration with the New York Stem Cell Foundation (NYSCF), requiring not only deep technical expertise but also strong interpersonal and project coordination skills.

The engineer will lead the design and integration of automated systems and robotics that improve operational efficiency, reduce ergonomic risks, and address workforce challenges. The ideal candidate will bring hands-on experience with controls and automation in laboratory environments, including familiarity with lab instrumentation, robotics, and regulated workflows.

This role will apply a systems-thinking approach to develop holistic, scalable automation solutions that support research, production, and innovation across the organization. The engineer will work cross-functionally with teams across JMCRS and Research Services to ensure solutions are aligned with JAX's scientific and operational goals.

Success in this role will require:

• Clear and proactive communication with internal and external stakeholders.
• Collaborative problem-solving across engineering, operations, & scientific teams.
• Adaptability in dynamic, multi-site environments.
• Ownership and accountability for high-impact deliverables.

The successful candidate must be prepared to engage intensively with NYSCF stakeholders, spending 60-80% of their time on-site in New York City during the first half of 2026 to ensure successful implementation and alignment with project goals. In the second half of 2026, travel may be up to 20% to NYSCF for continued support and optimization as well as other sites for additional projects.

The salary range is $92,192 - $133,678. Salary will be determined based on qualifications and experience.

Key Responsibilities (What you contribute):

• Design, develop, and implement automation systems and robotics across JMCRS, Research Services, and in collaboration with NYSCF.
• Develop and validate liquid handling methods across diverse instrumentation (Hamilton, Agilent, Dynamic Devices, etc.).
• Create custom software solutions (macros, scripts, dashboards) to complement automated processes.
• Integrate automation platforms with Laboratory Information Management Systems (LIMS) and other data systems.
• Troubleshoot and maintain automation systems to ensure reliability and minimal downtime.
• Collaborate with cross-functional teams (biologists, software engineers, data scientists) to identify automation opportunities and define system requirements.
• Document system designs, procedures, and validation protocols.
• Lead or co-lead automation projects, including planning, budgeting, and vendor coordination.
• Evaluate and recommend emerging automation technologies and tools.
• Develop training materials and provide technical guidance to staff on automation systems.
• Ensure compliance with institutional safety standards and regulatory requirements.
• Apply Lean or Six Sigma methodologies to drive continuous improvement in automated processes.

Minimum Qualifications:

• Bachelor's Degree in Mechatronics, Electrical Engineering, Mechanical Engineering, or a closely related field with a focus on automation systems, robotics, or industrial controls.
• At least 5 years of relevant engineering experience developing and maintaining automated laboratory systems, including robotic instrumentation and liquid handling platforms.
• Certification in automation or robotics (e.g., ISA Certified Automation Professional (CAP), Certified Robotics Engineer (CRE), Certified Control Systems Technician (CCST), etc.).
• Programming experience in Python, C/C++, or structured text, with emphasis on robotic instrument and liquid handler programming (Hamilton, Agilent, Dynamic Devices) and API-based integrations for lab automation.
• Proficiency in PLC programming, HMI development, and industrial robotics, including integration with Laboratory Information Management Systems (LIMS) and experience with custom automation software solutions.
• Experience integrating automation platforms with LIMS and data pipelines.
• Strong understanding of control systems, automation hardware, and system integration.
• Excellent troubleshooting and problem-solving skills in technical environments.
• Familiarity with safety and ergonomic standards in automation design.
• Experience with vision systems, and data acquisition tools.
• Knowledge of Lean Manufacturing or Six Sigma principles.
• Experience working in GMP or regulated laboratory environments.

Preferred Qualifications:

• Master's Degree.
• 10+ years of relevant engineering experience.
• Certification in Lean or Six Sigma (green belt level).
• SolidWorks or AutoCAD Professional Certification.
• Proficiency in MS Project or similar software.
• Experience with programming robotic instruments/liquid handlers and custom software development.
• Familiarity with CAD, microcontroller programming, and 3D printing for custom fixtures.
• Experience with robotics, motion control, or mechatronic systems.

About JAX:

The Jackson Laboratory is an independent, nonprofit biomedical research institution with a National Cancer Institute-designated Cancer Center and nearly 3,000 employees in locations across the United States (Maine, Connecticut, California),Japan andChina. Its mission is to discover precise genomic solutions for disease and empower the global biomedical community in the shared quest to improve human health.

Founded in 1929, JAX applies over nine decades of expertise in genetics to increase understanding of human disease, advancing treatments and cures for cancer, neurological and immune disorders, diabetes, aging and heart disease. It models and interprets genomic complexity, integrates basic research with clinical application, educates current and future scientists, and provides critical data, tools and services to the global biomedical community. For more information, please visitwww.jax.org.

EEO Statement:

The Jackson Laboratory provides equal employment opportunities to all employees and applicants for employment in all job classifications without regard to race, color, religion, age, mental disability, physical disability, medical condition, gender, sexual orientation, genetic information, ancestry, marital status, national origin, veteran status, and other classifications protected by applicable state and local non-discrimination laws.